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hydroroot 2.2.1.dev0 documentation - Home hydroroot 2.2.1.dev0 documentation - Home
  • Installation
  • Quick start
  • Gallery
  • Modeling principles
  • HydroRoot’s API
  • References
  • GitHub
  • Installation
  • Quick start
  • Gallery
  • Modeling principles
  • HydroRoot’s API
  • References
  • GitHub

Section Navigation

  • Simulated root
  • RSML architecture
  • Measured architecture
  • Parameters class
  • Radial conductivity
  • Solute and water transport parameters
  • Example of cut and flow (CnF) analysis
  • Boursiac et al. 2022
  • Gallery

Gallery#

Architectures#

These examples explore the different ways to have RSA, either by generating it or from measurements.

Simulated root
RSML architecture
Measured architecture

HydroRoot’s Parameters class#

Parameters is a python class that manage model parameters allowing for example to use yaml file as input.

Parameters class

Hydraulic parameters adjustment#

These are examples showing how to determine transport parameters from experiments.

Radial conductivity
Solute and water transport parameters
Example of cut and flow (CnF) analysis

Paper Boursiac et al. 2022#

This notebook allow to reproduce all figures of the paper:

Yann Boursiac, Christophe Pradal, Fabrice Bauget, Mikaël Lucas, Stathis Delivorias, Christophe Godin, Christophe Maurel, Phenotyping and modeling of root hydraulic architecture reveal critical determinants of axial water transport, Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1289–1306, <https://doi.org/10.1093/plphys/kiac281>

Boursiac et al. 2022

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