Index

A

add_branching() (in module openalea.hydroroot.generator.measured_root)

axial() (in module openalea.hydroroot.conductance)

C

compute_K() (in module openalea.hydroroot.conductance) compute_k() (in module openalea.hydroroot.conductance) compute_length() (in module openalea.hydroroot.radius) compute_relative_position() (in module openalea.hydroroot.radius)

compute_surface() (in module openalea.hydroroot.radius) compute_volume() (in module openalea.hydroroot.radius) cont_radius() (in module openalea.hydroroot.radius) cut() (in module openalea.hydroroot.flux) cut_and_set_conductance() (in module openalea.hydroroot.flux)

D

derivative_osmotic_p_peg() (in module openalea.hydroroot.water_solute_transport) derivative_viscosity_peg() (in module openalea.hydroroot.water_solute_transport)

diff() (in module openalea.hydroroot.length) discont_radius() (in module openalea.hydroroot.radius) discretize() (in module openalea.hydroroot.law)

E

export_mtg_to_aqua_file() (in module openalea.hydroroot.hydro_io)

export_mtg_to_rsml() (in module openalea.hydroroot.hydro_io) expovariate_law() (in module openalea.hydroroot.law)

F

fit_law() (in module openalea.hydroroot.length) fit_length() (in module openalea.hydroroot.length)

fit_property_from_spline() (in module openalea.hydroroot.conductance) Flux (class in openalea.hydroroot.flux) flux() (in module openalea.hydroroot.flux)

G

generate_g() (in module openalea.hydroroot.generator.markov)

get_root_visitor() (in module openalea.hydroroot.display) get_root_visitor_with_point() (in module openalea.hydroroot.display)

H

histo_relative_law() (in module openalea.hydroroot.law) hydroroot() (in module openalea.hydroroot.main) hydroroot_flow() (in module openalea.hydroroot.main)

hydroroot_from_data() (in module openalea.hydroroot.main) hydroroot_mtg() (in module openalea.hydroroot.main) hydroroot_solute_flow() (in module openalea.hydroroot.main)

I

import_rsml_to_discrete_mtg() (in module openalea.hydroroot.hydro_io) init_calculation() (openalea.hydroroot.init_parameter.Parameters method)

init_some_MTG_properties() (in module openalea.hydroroot.water_solute_transport) intercept() (in module openalea.hydroroot.analysis)

L

length_law() (in module openalea.hydroroot.law)

linear() (in module openalea.hydroroot.generator.markov)

M

markov_binary_tree() (in module openalea.hydroroot.generator.markov) module openalea.hydroroot.analysis openalea.hydroroot.conductance openalea.hydroroot.display openalea.hydroroot.flux openalea.hydroroot.generator.markov openalea.hydroroot.generator.measured_root openalea.hydroroot.hydro_io openalea.hydroroot.init_parameter openalea.hydroroot.law openalea.hydroroot.length openalea.hydroroot.main openalea.hydroroot.radius openalea.hydroroot.read_file openalea.hydroroot.solver_wrapper openalea.hydroroot.water_solute_transport

mtg_builder() (in module openalea.hydroroot.generator.measured_root) mtg_from_aqua_data() (in module openalea.hydroroot.generator.measured_root) mtg_scene() (in module openalea.hydroroot.display) multi_law() (in module openalea.hydroroot.law) my_colormap() (in module openalea.hydroroot.display) my_seed() (in module openalea.hydroroot.generator.markov)

N

nb_roots() (in module openalea.hydroroot.analysis)

O

openalea.hydroroot.analysis module openalea.hydroroot.conductance module openalea.hydroroot.display module openalea.hydroroot.flux module openalea.hydroroot.generator.markov module openalea.hydroroot.generator.measured_root module openalea.hydroroot.hydro_io module openalea.hydroroot.init_parameter module

openalea.hydroroot.law module openalea.hydroroot.length module openalea.hydroroot.main module openalea.hydroroot.radius module openalea.hydroroot.read_file module openalea.hydroroot.solver_wrapper module openalea.hydroroot.water_solute_transport module ordered_radius() (in module openalea.hydroroot.radius) osmotic_p_peg() (in module openalea.hydroroot.water_solute_transport)

P

Parameters (class in openalea.hydroroot.init_parameter) parameters_to_list() (openalea.hydroroot.init_parameter.Parameters method) plot() (in module openalea.hydroroot.display) poiseuille() (in module openalea.hydroroot.conductance) pressure_calculation() (in module openalea.hydroroot.water_solute_transport)

pressure_calculation_drag() (in module openalea.hydroroot.water_solute_transport) pressure_calculation_drag_permeating() (in module openalea.hydroroot.water_solute_transport) pressure_calculation_no_non_permeating_solutes() (in module openalea.hydroroot.water_solute_transport) property_scale_bar() (in module openalea.hydroroot.display) pure_hydraulic_model() (in module openalea.hydroroot.solver_wrapper)

R

radial() (in module openalea.hydroroot.conductance) radial_step() (in module openalea.hydroroot.conductance) radius() (in module openalea.hydroroot.radius) ramification_length_law() (in module openalea.hydroroot.flux) read_archi_data() (in module openalea.hydroroot.read_file)

read_file() (openalea.hydroroot.init_parameter.Parameters method) read_rsml() (in module openalea.hydroroot.hydro_io) readCSVFile() (in module openalea.hydroroot.read_file) reference_relative_law() (in module openalea.hydroroot.law) root_builder() (in module openalea.hydroroot.main) run() (openalea.hydroroot.flux.Flux method)

S

segments_at_length() (in module openalea.hydroroot.flux) set_conductances() (in module openalea.hydroroot.conductance)

setting_k0_according_to_order() (in module openalea.hydroroot.conductance) shuffle_axis() (in module openalea.hydroroot.generator.markov) soil_1D() (in module openalea.hydroroot.main)

V

viscosity_peg() (in module openalea.hydroroot.water_solute_transport)

W

water_solute_model() (in module openalea.hydroroot.solver_wrapper)